STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1634Putative membrane protein; Similar to ABC type transport system permease protein; Conserved hypothetical protein. (526 aa)    
Predicted Functional Partners:
llmg_1635
Putative ABC transporter ATP-binding protein; Specificity unclear.
 
     0.947
llmg_1040
Acetyltransferase, GNAT family.
  
     0.685
llmg_2451
Conserved hypothetical protein; Transcriptional regulator, IPR010982: Lambda repressor-like, DNA-binding.
  
     0.554
llmg_1636
Putative permease protein; TIGRFAM 2A78: Carboxylate/Amino Acid/Amine Transporter; Conserved hypothetical protein.
       0.501
llmg_1633
Conserved hypothetical protein; Similar to predicted ring-cleavage extradiol dioxygenase; Family membership.
       0.487
llmg_1726
Putative galactose-1-phosphate uridylyltransferase; High confidence in function and specificity.
  
     0.476
llmg_2150
Hypothetical protein.
  
     0.452
llmg_2064
Similar to oxidoreductases; Oxidoreductase, Glycine/D-amino acid oxidase; High confidence in function and specificity.
  
     0.420
llmg_0070
Putative permease; Major facilitator superfamily MFS_1; Family membership.
  
     0.418
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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