STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1675ABC transporter ATP-binding protein; Specificity unclear. (220 aa)    
Predicted Functional Partners:
llmg_1676
ABC transporter permease protein; Protein of unknown function DUF214; Function unclear.
 
 
 0.957
dppD
Dipeptide transport ATP-binding protein dppD; High confidence in function and specificity; Belongs to the ABC transporter superfamily.
 
     
0.769
llmg_0501
ABC transporter ATP binding protein; Specificity unclear.
  
 0.757
llmg_1457
oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein; Specificity unclear; Belongs to the ABC transporter superfamily.
 
    
0.733
llmg_1467
Putative ABC transporter permease protein; Similar to ABC-type antimicrobial peptide transport system, permease component; Specificity unclear.
  
 
 0.684
llmg_1853
ABC transporter ATP-binding and permease protein; Protein of unknown function DUF214; Family membership.
 
 
0.646
llmg_0625
Putative ABC transporter permease protein; Protein of unknown function DUF214; Conserved hypothetical protein.
  
 
 0.616
llmg_2547
Conserved hypothetical protein; ABC-type transport system, involved in lipoprotein release, permease component.
  
 
 0.595
gltP
Amino acid ABC transporter permease protein; High confidence in function and specificity.
 
 
    0.496
rpsE
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
   
 0.435
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.