STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpXPenicillin-binding protein; High confidence in function and specificity. (765 aa)    
Predicted Functional Partners:
pbp2A
Penicillin-binding protein 2a; PF00912: Transglycosylase; High confidence in function and specificity.
 
 
 0.992
ponA
Putative penicillin-binding protein 1a; Includes: Penicillin- insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]., PBP_1a_fam: penicillin-binding protein, 1A family; High confidence in function and specificity.
 
 
 0.986
pbp1B
Penicillin-binding protein 1B; High confidence in function and specificity.
 
 
 0.984
dacB
DacB protein; High confidence in function and specificity.
   
 
 0.965
pbp2B
Penicillin-binding protein 2B; High confidence in function and specificity.
  
  
0.950
dacA
DacA protein; D-alanyl-D-alanine carboxypeptidase precursor, PF00768: D-alanyl-D-alanine carboxypeptidase; High confidence in function and specificity; Belongs to the peptidase S11 family.
  
 
 0.928
ftsW1
Cell division protein ftsW1; rodA_shape: rod shape-determining protein RodA; High confidence in function and specificity; Belongs to the SEDS family.
 
 
 0.922
ftsL
Cell division protein.
  
 
 0.915
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 0.913
prsA-2
Conserved hypothetical protein; Putative phosphoribosylpyrophosphate synthetase.
      
 0.912
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.