STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1727ABC transporter permease protein. (883 aa)    
Predicted Functional Partners:
llmg_1726
Putative galactose-1-phosphate uridylyltransferase; High confidence in function and specificity.
     
 0.956
ps115
Phage repressor; Family membership.
      
 0.901
ps108
Ps108 protein; Similar to ps120 from IL1403.
      
 0.901
llmg_1728
Putative secreted protein.
       0.773
llmg_0579
Putative membrane protein; GtrA-like protein; Conserved hypothetical protein.
 
  
 0.736
llmg_2049
Conserved hypothetical protein.
  
     0.715
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.670
pmpA
Foldase protein prsA precursor; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
 
     0.629
galT
UDP-glucose--hexose-1-phosphate uridylyltransferase; High confidence in function and specificity.
      
 0.626
llmg_0564
Putative soluble lytic murein transglycosylase; Similar to pneumococcal vaccine antigen A; Specificity unclear.
  
     0.615
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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