STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmaATranscriptional regulator, MarR family; High confidence in function and specificity. (160 aa)    
Predicted Functional Partners:
llmg_1819
Conserved hypothetical protein; Putative patatin like protein.
       0.773
rmeB
Transcriptional regulator, MerR family; High confidence in function and specificity.
   
  
 0.754
kinE
Sensor kinase protein; High confidence in function and specificity.
   
  
 0.754
llrB
Two-component system regulator llrB; Response regulator receiver domain; High confidence in function and specificity.
   
  
 0.753
rmeC
Transcriptional regulator, MerR family; Putative DNA binding HTH containing; Family membership.
      
 0.752
rmaI
Transcriptional regulator, MarR family; High confidence in function and specificity.
      
 0.752
rmaX
PF01047: MarR family; Conserved hypothetical protein.
      
 0.683
kinD
Sensor protein kinase kinD; Histidine kinase; High confidence in function and specificity.
      
 0.667
llrD
Two-component system regulator llrD; Response regulator receiver domain; High confidence in function and specificity.
   
  
 0.614
rmaB
Transcriptional regulator, MarR family; High confidence in function and specificity.
  
   
 0.590
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.