STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmrAMultidrug resistance ABC transporter ATP-binding and permease protein; Efflux transporter for a variety of amphiphilic cationic compounds, including antibiotics; Belongs to the ABC transporter superfamily. Multidrug exporter LmrA (TC 3.A.1.117.1) family. (590 aa)    
Predicted Functional Partners:
llmg_0578
Ribonuclease BN-like family; Function unclear.
      
 0.960
lmrP
Multidrug resistance protein; PF07690: Major facilitator superfamily I, TIGR00880: Multidrug resistance protein; High confidence in function and specificity.
      
 0.960
potA
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.901
napC
Multidrug-efflux transporter protein; Putative tetracycline resistance protein; High confidence in function and specificity.
      
 0.900
pmrB
Multidrug resistance protein, Integral membrane protein; Conserved hypothetical protein.
      
 0.759
pmrA
Multidrug resistance efflux pump; Major Facilitator Superfamily; High confidence in function and specificity.
      
 0.755
lmrC
ABC transporter ATP binding and permease protein; High confidence in function and specificity.
 
 
0.692
lysQ
Amino-acid permease lysQ; Involved in histidine uptake. Has low affinity for arginine and lysine. Plays no significant role in the excretion of accumulated histidine.
      
 0.688
choQ
Choline ABC transporter ATP binding protein; High confidence in function and specificity.
 
    
0.678
llmg_0989
ABC transporter ATP binding and permease protein; Family membership.
 
    
0.677
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.