Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bioY | birA1 | llmg_1964 | llmg_1963 | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.982 |
| bioY | llmg_1962 | llmg_1964 | llmg_1962 | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | 0.869 |
| bioY | llmg_1965 | llmg_1964 | llmg_1965 | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity. | 0.642 |
| bioY | tenA | llmg_1964 | llmg_1961 | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | Transcriptional activator TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.448 |
| birA1 | bioY | llmg_1963 | llmg_1964 | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | 0.982 |
| birA1 | llmg_1962 | llmg_1963 | llmg_1962 | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | 0.818 |
| birA1 | llmg_1965 | llmg_1963 | llmg_1965 | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity. | 0.545 |
| birA1 | tenA | llmg_1963 | llmg_1961 | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Transcriptional activator TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.458 |
| llmg_1962 | bioY | llmg_1962 | llmg_1964 | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | 0.869 |
| llmg_1962 | birA1 | llmg_1962 | llmg_1963 | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.818 |
| llmg_1962 | llmg_1965 | llmg_1962 | llmg_1965 | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity. | 0.532 |
| llmg_1962 | tenA | llmg_1962 | llmg_1961 | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | Transcriptional activator TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.436 |
| llmg_1965 | bioY | llmg_1965 | llmg_1964 | Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity. | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | 0.642 |
| llmg_1965 | birA1 | llmg_1965 | llmg_1963 | Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity. | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.545 |
| llmg_1965 | llmg_1962 | llmg_1965 | llmg_1962 | Putative AMP-binding enzyme; Acetyl-coenzyme A synthetase; High confidence in function and specificity. | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | 0.532 |
| tenA | bioY | llmg_1961 | llmg_1964 | Transcriptional activator TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Putative biotin synthase; Probably a biotin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins. | 0.448 |
| tenA | birA1 | llmg_1961 | llmg_1963 | Transcriptional activator TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | biotin--[acetyl-CoA-carboxylase] ligase and biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.458 |
| tenA | llmg_1962 | llmg_1961 | llmg_1962 | Transcriptional activator TenA; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region; CHY zinc finger; Conserved hypothetical protein. | 0.436 |