STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_1972Conserved hypothetical protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (405 aa)    
Predicted Functional Partners:
llmg_1974
Putative ATP-dependent transporter; Conserved hypothetical protein.
  
 0.998
sufB
Conserved hypothetical protein; Putative FeS assembly protein SufB.
 
 0.995
nifU
Conserved hypothetical protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 
 0.995
llmg_1973
Conserved hypothetical protein; Putative FeS assembly protein SufD.
 
 0.994
trxB1
TrxB1 protein; High confidence in function and specificity.
  
 
 0.914
metB1
Pseudogene.
    
 0.902
llmg_1584
Endonuclease/exonuclease/phosphatase family protein; Family membership.
    
   0.793
llmg_1971
Unknown protein; Uncharacterized membrane-associated protein.
       0.775
nifJ
NifJ protein; Pyruvate:ferredoxin (flavodoxin) oxidoreductase, Thiamine pyrophosphate enzyme, C-terminal TPP binding domain, pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; High confidence in function and specificity.
  
  
 0.598
nifZ
Pyridoxal-phosphate dependent aminotransferase; Aminotransferase class-V; High confidence in function and specificity.
    
0.582
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.