STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2023UspA Universal stress protein family; High confidence in function and specificity. (145 aa)    
Predicted Functional Partners:
llmg_0195
Putative NADH dehydrogenase; Oxygen-insensitive NAD(P)H nitroreductase; High confidence in function and specificity.
   
  
 0.795
llmg_2022
Hypothetical protein predicted by Glimmer/Critica.
       0.705
llmg_0485
Putative membrane protein; PF06271.1: RDD family protein, contains AL9 export element; Family membership.
     
 0.562
llmg_2513
Putative transport protein; Region start changed from 2468930 to 2468918 (-12 bases).
 
   
 0.562
llmg_2515
Hypothetical protein predicted by Glimmer/Critica.
      
 0.555
llmg_0490
Sugar transport system permease protein; Specificity unclear.
      
 0.551
llmg_1104
Drug-export protein; Family membership.
      
 0.551
llmg_2290
Conserved hypothetical protein; IPR000051: SAM (and some other nucleotide) binding motif.
  
     0.529
dinG
Probable ATP-dependent helicase dinG homolog; 3'-5' exonuclease.
       0.510
llmg_1310
Conserved hypothetical protein; TPR domain protein.
  
     0.472
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.