STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2064Similar to oxidoreductases; Oxidoreductase, Glycine/D-amino acid oxidase; High confidence in function and specificity. (366 aa)    
Predicted Functional Partners:
noxC
NADH oxidase; High confidence in function and specificity.
  
 
 0.759
noxE
NADH oxidase; Catalyzes the four-electron reduction of molecular oxygen to water. Active on beta-NADH, but not on alpha-NADH, beta-NADPH or alpha- NADPH. Under aerobic conditions, oxygen acts as the electron acceptor. Under anaerobic conditions, DCIP and MB can replace oxygen as the electron acceptor; Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family.
 
 
 0.684
alr
Alr protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.
  
  
 0.590
llmg_1417
Putative membrane protein; Putative autolytic lysozyme; Conserved hypothetical protein.
  
     0.556
llmg_2065
Aldo/keto reductase family; Family membership.
  
  
 0.553
llmg_2562
Conserved hypothetical protein; Pfam: Putative rRNA methylase; Family membership.
  
  
 0.544
gltB
Glutamate synthase, large subunit; PF01645: Conserved region in glutamate synthase; High confidence in function and specificity.
  
  
 0.502
llmg_2066
Multidrug resistance protein B, permease of the Major facilitator superfamily, EmrB family; High confidence in function and specificity.
  
  
 0.499
llmg_2163
Conserved hypothetical protein; Contains PspC domain.
  
    0.496
trmH
23S ribosomal RNA methyltransferase, TrmH family; High confidence in function and specificity; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
     
 0.477
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.