STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps449Conserved hypothetical protein; Bacteriophage protein of unknown function DUF646. (168 aa)    
Predicted Functional Partners:
ps450
Conserved hypothetical protein; Putative tail component protein.
       0.800
ps448
Conserved hypothetical protein.
       0.800
ps447
Conserved hypothetical protein; Uncharacterized phage protein (possible DNA packaging).
       0.773
ps451
Phage major tail protein; High confidence in function and specificity.
       0.717
ps446
Putative major head protein precursor; Phage major capsid protein, HK97 phage capsid family; High confidence in function and specificity.
       0.512
ps445
Conserved hypothetical protein; Similar to ATP-dependent Clp protease proteolytic subunit; High confidence in function and specificity; Belongs to the peptidase S14 family.
       0.462
ps444
Phage portal protein, HK97 family; High confidence in function and specificity.
       0.447
ps442
Phage Terminase, large subunit; Conserved hypothetical protein.
       0.442
ps452
Putative phage tail component; High confidence in function and specificity.
       0.430
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.