STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps444Phage portal protein, HK97 family; High confidence in function and specificity. (390 aa)    
Predicted Functional Partners:
ps446
Putative major head protein precursor; Phage major capsid protein, HK97 phage capsid family; High confidence in function and specificity.
 
 
 0.968
ps442
Phage Terminase, large subunit; Conserved hypothetical protein.
 
   
 0.961
ps445
Conserved hypothetical protein; Similar to ATP-dependent Clp protease proteolytic subunit; High confidence in function and specificity; Belongs to the peptidase S14 family.
 
  
 0.943
ps440
Pseudogene; Transposase for insertion sequence element IS905L, Transposase, Mutator family, contains astop codon at position 606; High confidence in function and specificity.
 
  
 0.877
ps451
Phage major tail protein; High confidence in function and specificity.
 
     0.863
ps439
Conserved hypothetical protein; Putative restriction endonuclease.
 
  
 0.844
ps453
Putative phage tail component; High confidence in function and specificity.
 
   
 0.818
ps443
Putative head-tail joining protein.
       0.773
ps409
Phage antirepressor protein; Conserved hypothetical protein.
 
     0.593
ps315
Hypothetical protein predicted by Glimmer/Critica; TIGR01618: phage nucleotide-binding protein; Conserved hypothetical protein.
  
     0.544
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.