STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps427Conserved hypothetical protein; Protein of unknown function (DUF1642). (185 aa)    
Predicted Functional Partners:
ps429
Conserved hypothetical protein; Protein of unknown function DUF1140.
       0.773
ps428
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.773
ps426
Conserved hypothetical protein.
       0.741
ps430
No similarity.
       0.727
ps425
Hypothetical protein predicted by Glimmer/Critica.
       0.445
ps424
Hypothetical protein predicted by Glimmer/Critica.
       0.445
ps423
Hypothetical protein predicted by Glimmer/Critica.
       0.445
ps422
Hypothetical protein predicted by Glimmer/Critica.
       0.432
ps421
Hypothetical protein predicted by Glimmer/Critica.
       0.415
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.