STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2149NUDIX hydrolase; Conserved hypothetical protein. (173 aa)    
Predicted Functional Partners:
llmg_2150
Hypothetical protein.
 
     0.791
fmt
Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
       0.773
llmg_2148
Hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase.
       0.773
llmg_2151
Hypothetical protein ycaQ; Uncharacterized protein conserved in bacteria.
       0.752
llmg_0070
Putative permease; Major facilitator superfamily MFS_1; Family membership.
 
    0.609
llmg_2152
Hypothetical protein ycaQ.
       0.480
llmg_2143
Putative 20-kDa protein; Protein of unknown function DUF322, Protein of unknown function (DUF322); Conserved hypothetical protein.
 
     0.476
llmg_1040
Acetyltransferase, GNAT family.
 
    0.461
priA
Primosomal protein N' (Replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
       0.443
llmg_2146
Conserved hypothetical protein; -.
       0.429
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.