STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acmBN-acetylglucosaminidase; Peptidoglycan hydrolase; High confidence in function and specificity. (538 aa)    
Predicted Functional Partners:
llmg_2005
Putative cell wall hydrolase.
      
 0.759
ps356
Endolysin; PF01183: Glycosyl hydrolases family 25; High confidence in function and specificity.
      
 0.683
dacB
DacB protein; High confidence in function and specificity.
 
    
 0.654
lytR
Cell envelope-related transcriptional attenuator domain, lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain; Conserved hypothetical protein.
      
 0.626
llmg_2164
Hypothetical protein.
 
     0.544
acmD
N-acetylglucosaminidase; High confidence in function and specificity.
  
   
0.535
acmA
N-acetylglucosaminidase; Hydrolyzes the cell wall of L.lactis and M.lysodeikticus. Required for cell separation during growth; Belongs to the glycosyl hydrolase 73 family.
  
   
0.524
llmg_1594
Gamma-glutamyl-diamino acid-endopeptidase; Region start changed from 1568256 to 1568289 (33 bases).
 
      0.524
secG
Protein-export membrane protein secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.462
pbp2B
Penicillin-binding protein 2B; High confidence in function and specificity.
      
 0.461
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.