STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2194Conserved hypothetical protein; Region start changed from 2159382 to 2159322 (-60 bases). (357 aa)    
Predicted Functional Partners:
ftsX
Cell division protein ftsX homolog; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.642
llmg_2191
Hypothetical protein.
       0.594
llmg_2192
Hypothetical protein predicted by Glimmer/Critica.
       0.594
rsgA
Conserved hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.594
ftsE
Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
  
   
 0.557
usp45
Secreted 45 kDa protein precursor; PF05257: CHAP domain, IPR011050: Pectin lyase- like; Conserved hypothetical protein.
  
   
0.487
llmg_1773
Conserved hypothetical protein; CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
    0.481
llmg_0398
Conserved hypothetical protein; PF02566.5: OsmC-like protein.
  
  
 0.477
comGB
Putative competence protein ComGB; PF00482: Bacterial type II secretion system protein F domain, putative membrane protein; Conserved hypothetical protein.
    
   0.471
comGA
Putative competence protein ComGA; PF00437: Type II/IV secretion system protein; Conserved hypothetical protein.
    
   0.471
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.