STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ps518Hypothetical phage protein predicted by Glimmer/Critica. (180 aa)    
Predicted Functional Partners:
llmg_2249
Hypothetical protein.
       0.492
ps519
PF03592: Terminase small subunit; Conserved hypothetical protein.
       0.492
ps517
Putative Dna Primase; PF03288: Poxvirus D5 protein-like, TIGR01613: phage/plasmid primase, P4 family, C-terminal domain; Conserved hypothetical protein.
       0.437
ps516
Hypothetical phage protein predicted by Glimmer/Critica.
       0.434
ps515
Hypothetical phage protein predicted by Glimmer/Critica.
       0.434
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.