STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2347Conserved hypothetical protein; PF00288: GHMP kinases putative ATP-binding protein; Family membership. (324 aa)    
Predicted Functional Partners:
gmhA
GmhA protein; PF01380: Sugar isomerase (SIS domain), TIGR00441: phosphoheptose isomerase; High confidence in function and specificity.
 
 0.999
llmg_2345
TIGR01656 : histidinol-phosphate phosphatase family domain, hisB like protein; High confidence in function and specificity.
 
 0.996
llmg_2348
Putative membrane protein.
       0.693
dnaC
DnaC protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
     
 0.690
llmg_2344
PF00535: Glycosyl transferase, family 2; Family membership.
  
    0.609
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
      
 0.559
fabZ
(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
      
 0.550
llmg_2350
PF00535: Glycosyl transferase, family 2; Family membership.
  
    0.527
rmlC
dTDP-4-keto-6-deoxyglucose-3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase, dTDP-4-keto-6-deoxyglucose 3,5-epimerase, dTDP-L-rhamnose synthetase; High confidence in function and specificity.
  
    0.522
llmg_2349
PF01531: Glycosyl transferase, family 11; Family membership.
       0.516
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.