STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2394Hypothetical protein predicted by Glimmer/Critica. (143 aa)    
Predicted Functional Partners:
llmg_2393
Conserved hypothetical protein; PF04239: Protein of unknown function DUF421.
 
    0.947
llmg_2272
Conserved hypothetical protein; IPR004129: Glycerophosphoryl diester phosphodiesterase, Glycerophosphoryl diester phosphodiesterase.
 
     0.668
llmg_2395
Conserved hypothetical protein; Putative FMN-binding protein, IPR009002: FMN-binding split barrel.
       0.510
llmg_0056
Conserved hypothetical protein; Bacterial protein of unknown function DUF915; Family membership.
  
     0.476
llmg_1726
Putative galactose-1-phosphate uridylyltransferase; High confidence in function and specificity.
  
     0.411
gadR
Positive regulator GadR; Activates chloride dependent transcription of gadCB, TIGR01716: Transcriptional activator Rgg/GadR/MutR, C-terminal domain; High confidence in function and specificity.
  
     0.410
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.