Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acmA | htrA | llmg_0280 | llmg_2419 | N-acetylglucosaminidase; Hydrolyzes the cell wall of L.lactis and M.lysodeikticus. Required for cell separation during growth; Belongs to the glycosyl hydrolase 73 family. | Housekeeping protease; Degrades abnormal exported proteins and responsible for the propeptide processing of a natural pro-protein and for the maturation of a native protein. It also plays a prominent role in stress (heat shock, ethanol, puromycin and NaCl) resistance during active exponential growth (By similarity); Belongs to the peptidase S1C family. | 0.964 |
| acmA | usp45 | llmg_0280 | llmg_2507 | N-acetylglucosaminidase; Hydrolyzes the cell wall of L.lactis and M.lysodeikticus. Required for cell separation during growth; Belongs to the glycosyl hydrolase 73 family. | Secreted 45 kDa protein precursor; PF05257: CHAP domain, IPR011050: Pectin lyase- like; Conserved hypothetical protein. | 0.970 |
| clpC | clpP | llmg_0615 | llmg_0638 | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.983 |
| clpC | dnaK | llmg_0615 | llmg_1574 | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.948 |
| clpC | groEL2 | llmg_0615 | llmg_0411 | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.884 |
| clpC | groES | llmg_0615 | llmg_0410 | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | Heat shock protein groES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.850 |
| clpC | htrA | llmg_0615 | llmg_2419 | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | Housekeeping protease; Degrades abnormal exported proteins and responsible for the propeptide processing of a natural pro-protein and for the maturation of a native protein. It also plays a prominent role in stress (heat shock, ethanol, puromycin and NaCl) resistance during active exponential growth (By similarity); Belongs to the peptidase S1C family. | 0.707 |
| clpP | clpC | llmg_0638 | llmg_0615 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | 0.983 |
| clpP | dnaK | llmg_0638 | llmg_1574 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.955 |
| clpP | groEL2 | llmg_0638 | llmg_0411 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.944 |
| clpP | groES | llmg_0638 | llmg_0410 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Heat shock protein groES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.883 |
| clpP | htrA | llmg_0638 | llmg_2419 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Housekeeping protease; Degrades abnormal exported proteins and responsible for the propeptide processing of a natural pro-protein and for the maturation of a native protein. It also plays a prominent role in stress (heat shock, ethanol, puromycin and NaCl) resistance during active exponential growth (By similarity); Belongs to the peptidase S1C family. | 0.972 |
| clpP | pmpA | llmg_0638 | llmg_1907 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | Foldase protein prsA precursor; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins. | 0.478 |
| dnaK | clpC | llmg_1574 | llmg_0615 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | 0.948 |
| dnaK | clpP | llmg_1574 | llmg_0638 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.955 |
| dnaK | groEL2 | llmg_1574 | llmg_0411 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.997 |
| dnaK | groES | llmg_1574 | llmg_0410 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Heat shock protein groES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.993 |
| dnaK | htrA | llmg_1574 | llmg_2419 | Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Housekeeping protease; Degrades abnormal exported proteins and responsible for the propeptide processing of a natural pro-protein and for the maturation of a native protein. It also plays a prominent role in stress (heat shock, ethanol, puromycin and NaCl) resistance during active exponential growth (By similarity); Belongs to the peptidase S1C family. | 0.755 |
| groEL2 | clpC | llmg_0411 | llmg_0615 | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | ATP-dependent Clp protease ATP-binding subunit; High confidence in function and specificity; Belongs to the ClpA/ClpB family. | 0.884 |
| groEL2 | clpP | llmg_0411 | llmg_0638 | Heat shock protein groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. | 0.944 |
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