STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntRPF01418: Helix-turn-helix domain, RpiR family, PF01380: SIS domain sugar isomerase domain; Conserved hypothetical protein. (282 aa)    
Predicted Functional Partners:
busR
Transcriptional repressor BusR, GntR family; Repressor of the osmoprotectant uptake system; High confidence in function and specificity.
      
 0.905
tetR
Homeodomain-like, Bacterial regulatory proteins, tetR family.
      
 0.751
eriC
Putative chloride channel protein; High confidence in function and specificity.
   
  
 0.705
llmg_2471
Hypothetical protein predicted by Glimmer/Critica.
       0.645
llmg_0522
Putative transcriptional regulator; Contains sugar isomerase domain PF01380.10; Function unclear.
  
     0.608
llmg_0439
Transcriptional regulator, LacI family; Family membership.
  
     0.570
pstA
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
      
 0.551
lplA
Sugar ABC transporter substrate-binding protein; High confidence in function and specificity.
      
 0.550
bglP
Pseudogene; 3' end of bglR, Interrupted by insertion element; Conserved hypothetical protein.
  
  
 0.496
llmg_1426
Sucrose-specific PTS system IIBC component; High confidence in function and specificity.
  
  
 0.496
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.