STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2471Hypothetical protein predicted by Glimmer/Critica. (102 aa)    
Predicted Functional Partners:
llmg_1930
Membrane protein, putative; VanZ like family.
  
     0.694
ps111
Hypothetical protein, phage associated; Deoxyribonuclease precursor (EC 3.1.21.1) (Streptodornase) (DNase)., DNA/RNA non-specific endonuclease; High confidence in function and specificity.
  
     0.668
gntR
PF01418: Helix-turn-helix domain, RpiR family, PF01380: SIS domain sugar isomerase domain; Conserved hypothetical protein.
       0.645
llmg_0183
Hypothetical protein predicted by Glimmer/Critica.
  
     0.625
llmg_2041
Protein of unknown function DUF1211.
  
     0.620
mutT
Putative mutator protein; ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase)., NUDIX hydrolase, NUDIX domain; High confidence in function and specificity; Belongs to the Nudix hydrolase family.
  
     0.584
llmg_2508
Cell shape determining protein mreD; Region start changed from 2464405 to 2464456 (51 bases).
  
     0.552
llmg_0482
Uncharacterized protein conserved in bacteria.
  
     0.539
llmg_1190
Conserved hypothetical protein; PF00571: 2 CBS domains.
  
     0.506
llmg_1550
Conserved hypothetical protein; Protein of unknown function DUF402; Belongs to the UPF0374 family.
 
     0.459
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.