STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywjFPutative 3-hydroxyisobutyrate dehydrogenase; TIGR01505: 2-hydroxy-3-oxopropionate reductase; Conserved hypothetical protein. (293 aa)    
Predicted Functional Partners:
fadD
Long-chain acyl-CoA synthetase; Acetyl-coenzyme A synthetase; High confidence in function and specificity.
  
 
 0.832
pta
Phosphate acetyltransferase; High confidence in function and specificity.
     
 0.803
pfl
Pyruvate formate-lyase; High confidence in function and specificity.
   
 
  0.802
llmg_2495
Hypothetical protein predicted by Glimmer/Critica; Region start changed from 2452228 to 2452270 (42 bases).
       0.639
adhE
PF00465.7: Iron-containing alcohol dehydrogenase; High confidence in function and specificity; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.545
llmg_0970
Carboxymuconolactone decarboxylase family protein; Family membership.
  
  
 0.490
pcaC
Carboxymuconolactone decarboxylase family; High confidence in function and specificity.
  
  
 0.490
llmg_2497
Conserved hypothetical protein; PF01925: Protein of unknown function DUF81.
       0.460
llmg_1321
Conserved hypothetical protein; Putative Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.432
fbaA
Pseudogene; Transposase for insertion sequence element IS905M, contains a stop codon at position 606; Conserved hypothetical protein.
 
    0.431
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.