STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2497Conserved hypothetical protein; PF01925: Protein of unknown function DUF81. (283 aa)    
Predicted Functional Partners:
llmg_2496
Conserved hypothetical protein; PF07843: Protein of unknown function (DUF1634).
 
  
 0.965
htrA
Housekeeping protease; Degrades abnormal exported proteins and responsible for the propeptide processing of a natural pro-protein and for the maturation of a native protein. It also plays a prominent role in stress (heat shock, ethanol, puromycin and NaCl) resistance during active exponential growth (By similarity); Belongs to the peptidase S1C family.
    
 
 0.513
llmg_2495
Hypothetical protein predicted by Glimmer/Critica; Region start changed from 2452228 to 2452270 (42 bases).
       0.508
llmg_2498
Hypothetical protein predicted by Glimmer/Critica.
       0.505
ywjF
Putative 3-hydroxyisobutyrate dehydrogenase; TIGR01505: 2-hydroxy-3-oxopropionate reductase; Conserved hypothetical protein.
       0.460
pheT-2
phenylalanyl-tRNA synthetase beta chain; High confidence in function and specificity; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.457
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.