STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnHAsparagine synthetase (glutamine-hydrolyzing), PF00733: Asparagine synthase; High confidence in function and specificity. (625 aa)    
Predicted Functional Partners:
racD
Pseudogene; Contains a frameshift at position 321; Belongs to the aspartate/glutamate racemases family.
 
  
 0.996
asnB
Asparagine synthetase B; High confidence in function and specificity.
  
  
0.953
pyrB
Aspartate carbamoyltransferase; High confidence in function and specificity; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.928
argG
ArgG protein; Argininosuccinate synthase, Citrulline--aspartate ligase; High confidence in function and specificity; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.917
purA
Putative adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.915
ansB
L-asparaginase; High confidence in function and specificity.
     
 0.911
aspB
Aspartate aminotransferase (EC 2.6.1.1); High confidence in function and specificity.
   
 
 0.904
llmg_2505
Conserved hypothetical protein; Predicted ATP-grasp enzyme.
 
     0.895
thrA
Aspartate kinase; High confidence in function and specificity; Belongs to the aspartokinase family.
  
 
 0.856
udk
Udk protein; Uridine monophosphokinase; High confidence in function and specificity.
     
 0.695
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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