STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
llmg_2508Cell shape determining protein mreD; Region start changed from 2464405 to 2464456 (51 bases). (175 aa)    
Predicted Functional Partners:
mreC
Cell shape determining protein mreC; Involved in formation and maintenance of cell shape.
  
 
 0.956
llmg_1548
Putative phosphohydrolase; Family membership.
  
     0.676
usp45
Secreted 45 kDa protein precursor; PF05257: CHAP domain, IPR011050: Pectin lyase- like; Conserved hypothetical protein.
     
 0.641
llmg_2049
Conserved hypothetical protein.
  
     0.625
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
 
   
 0.623
llmg_1727
ABC transporter permease protein.
  
    0.584
llmg_2471
Hypothetical protein predicted by Glimmer/Critica.
  
     0.552
llmg_0579
Putative membrane protein; GtrA-like protein; Conserved hypothetical protein.
  
     0.546
ppiA
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.487
pbp2B
Penicillin-binding protein 2B; High confidence in function and specificity.
 
  
 0.473
Your Current Organism:
Lactococcus lactis
NCBI taxonomy Id: 416870
Other names: L. lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris MG1363, Lactococcus lactis subsp. cremoris str. MG1363, Lactococcus lactis subsp. cremoris strain MG1363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.