STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO05434.1YtoQ family protein. (146 aa)    
Predicted Functional Partners:
SDO05560.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
       0.691
SDO05465.1
precorrin-6A synthase (deacetylating).
       0.665
SDO05497.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.665
SDO05531.1
Cobalt-precorrin 5A hydrolase.
       0.665
SDO05594.1
precorrin-6A reductase.
       0.508
SDN70127.1
EamA-like transporter family protein.
  
     0.459
Your Current Organism:
Halomonas arcis
NCBI taxonomy Id: 416873
Other names: CGMCC 1.6494, H. arcis, Halomonas arcis Xu et al. 2007, Halomonas sp. AJ282, JCM 14607, LMG 23978, LMG:23978, strain AJ282
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.