Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO28760.1 | SDO28796.1 | SAMN04487951_11934 | SAMN04487951_11935 | Asparagine synthase (glutamine-hydrolysing). | Glycosyltransferase involved in cell wall bisynthesis. | 0.862 |
SDO28760.1 | SDO28837.1 | SAMN04487951_11934 | SAMN04487951_11936 | Asparagine synthase (glutamine-hydrolysing). | Hypothetical protein. | 0.822 |
SDO28760.1 | SDO28876.1 | SAMN04487951_11934 | SAMN04487951_11937 | Asparagine synthase (glutamine-hydrolysing). | EpsG family protein. | 0.773 |
SDO28796.1 | SDO28760.1 | SAMN04487951_11935 | SAMN04487951_11934 | Glycosyltransferase involved in cell wall bisynthesis. | Asparagine synthase (glutamine-hydrolysing). | 0.862 |
SDO28796.1 | SDO28837.1 | SAMN04487951_11935 | SAMN04487951_11936 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.836 |
SDO28796.1 | SDO28876.1 | SAMN04487951_11935 | SAMN04487951_11937 | Glycosyltransferase involved in cell wall bisynthesis. | EpsG family protein. | 0.773 |
SDO28837.1 | SDO28760.1 | SAMN04487951_11936 | SAMN04487951_11934 | Hypothetical protein. | Asparagine synthase (glutamine-hydrolysing). | 0.822 |
SDO28837.1 | SDO28796.1 | SAMN04487951_11936 | SAMN04487951_11935 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.836 |
SDO28837.1 | SDO28876.1 | SAMN04487951_11936 | SAMN04487951_11937 | Hypothetical protein. | EpsG family protein. | 0.773 |
SDO28876.1 | SDO28760.1 | SAMN04487951_11937 | SAMN04487951_11934 | EpsG family protein. | Asparagine synthase (glutamine-hydrolysing). | 0.773 |
SDO28876.1 | SDO28796.1 | SAMN04487951_11937 | SAMN04487951_11935 | EpsG family protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.773 |
SDO28876.1 | SDO28837.1 | SAMN04487951_11937 | SAMN04487951_11936 | EpsG family protein. | Hypothetical protein. | 0.773 |