Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER52422.1 | SER52449.1 | SAMN04487958_101434 | SAMN04487958_101435 | ATP-dependent DNA helicase UvrD. | Uncharacterized membrane protein, DUF373 family. | 0.584 |
SER52422.1 | SER52462.1 | SAMN04487958_101434 | SAMN04487958_101436 | ATP-dependent DNA helicase UvrD. | Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.678 |
SER52449.1 | SER52422.1 | SAMN04487958_101435 | SAMN04487958_101434 | Uncharacterized membrane protein, DUF373 family. | ATP-dependent DNA helicase UvrD. | 0.584 |
SER52449.1 | SER52462.1 | SAMN04487958_101435 | SAMN04487958_101436 | Uncharacterized membrane protein, DUF373 family. | Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | 0.578 |
SER52449.1 | SER70553.1 | SAMN04487958_101435 | SAMN04487958_102330 | Uncharacterized membrane protein, DUF373 family. | Hypothetical protein. | 0.455 |
SER52462.1 | SER52422.1 | SAMN04487958_101436 | SAMN04487958_101434 | Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | ATP-dependent DNA helicase UvrD. | 0.678 |
SER52462.1 | SER52449.1 | SAMN04487958_101436 | SAMN04487958_101435 | Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. | Uncharacterized membrane protein, DUF373 family. | 0.578 |
SER70553.1 | SER52449.1 | SAMN04487958_102330 | SAMN04487958_101435 | Hypothetical protein. | Uncharacterized membrane protein, DUF373 family. | 0.455 |