Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER51010.1 | SER51738.1 | SAMN04487958_101384 | SAMN04487958_101409 | Sulfur carrier protein ThiS. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.872 |
SER51010.1 | SER54520.1 | SAMN04487958_101384 | SAMN04487958_101513 | Sulfur carrier protein ThiS. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.888 |
SER51010.1 | SER64123.1 | SAMN04487958_101384 | SAMN04487958_10296 | Sulfur carrier protein ThiS. | 8-oxo-dGTP diphosphatase. | 0.947 |
SER51010.1 | SER93770.1 | SAMN04487958_101384 | SAMN04487958_104260 | Sulfur carrier protein ThiS. | Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.709 |
SER51010.1 | thiC | SAMN04487958_101384 | SAMN04487958_104259 | Sulfur carrier protein ThiS. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.864 |
SER51010.1 | thiE | SAMN04487958_101384 | SAMN04487958_105130 | Sulfur carrier protein ThiS. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.901 |
SER51010.1 | thiG | SAMN04487958_101384 | SAMN04487958_101385 | Sulfur carrier protein ThiS. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
SER51010.1 | thiM | SAMN04487958_101384 | SAMN04487958_105129 | Sulfur carrier protein ThiS. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.742 |
SER51738.1 | SER51010.1 | SAMN04487958_101409 | SAMN04487958_101384 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Sulfur carrier protein ThiS. | 0.872 |
SER51738.1 | SER54520.1 | SAMN04487958_101409 | SAMN04487958_101513 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.967 |
SER51738.1 | SER64123.1 | SAMN04487958_101409 | SAMN04487958_10296 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 8-oxo-dGTP diphosphatase. | 0.904 |
SER51738.1 | SER93770.1 | SAMN04487958_101409 | SAMN04487958_104260 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.999 |
SER51738.1 | thiC | SAMN04487958_101409 | SAMN04487958_104259 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.994 |
SER51738.1 | thiE | SAMN04487958_101409 | SAMN04487958_105130 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
SER51738.1 | thiG | SAMN04487958_101409 | SAMN04487958_101385 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.827 |
SER51738.1 | thiM | SAMN04487958_101409 | SAMN04487958_105129 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.994 |
SER54462.1 | SER54495.1 | SAMN04487958_101511 | SAMN04487958_101512 | H+/Cl-antiporter ClcA. | Putative membrane protein. | 0.888 |
SER54462.1 | SER54520.1 | SAMN04487958_101511 | SAMN04487958_101513 | H+/Cl-antiporter ClcA. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.869 |
SER54495.1 | SER54462.1 | SAMN04487958_101512 | SAMN04487958_101511 | Putative membrane protein. | H+/Cl-antiporter ClcA. | 0.888 |
SER54495.1 | SER54520.1 | SAMN04487958_101512 | SAMN04487958_101513 | Putative membrane protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.869 |
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