Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER50949.1 | SER55380.1 | SAMN04487958_101382 | SAMN04487958_101539 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Phosphoglycerol transferase. | 0.597 |
SER50949.1 | SER93111.1 | SAMN04487958_101382 | SAMN04487958_104229 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | DnaJ domain-containing protein. | 0.658 |
SER50949.1 | SES00901.1 | SAMN04487958_101382 | SAMN04487958_105231 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Hook-length control protein FliK. | 0.702 |
SER50949.1 | SES05053.1 | SAMN04487958_101382 | SAMN04487958_106104 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Membrane-bound lysozyme-inhibitor of c-type lysozyme. | 0.576 |
SER50949.1 | SES21537.1 | SAMN04487958_101382 | SAMN04487958_109149 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | AAA ATPase domain-containing protein. | 0.509 |
SER50949.1 | SES27007.1 | SAMN04487958_101382 | SAMN04487958_111112 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Hypothetical protein. | 0.571 |
SER50949.1 | SES35498.1 | SAMN04487958_101382 | SAMN04487958_11828 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Nuclease-related domain-containing protein. | 0.599 |
SER55380.1 | SER50949.1 | SAMN04487958_101539 | SAMN04487958_101382 | Phosphoglycerol transferase. | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | 0.597 |
SER55380.1 | SER55444.1 | SAMN04487958_101539 | SAMN04487958_101541 | Phosphoglycerol transferase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.622 |
SER55380.1 | SER55475.1 | SAMN04487958_101539 | SAMN04487958_101542 | Phosphoglycerol transferase. | ADP-heptose:LPS heptosyltransferase. | 0.608 |
SER55380.1 | SER93111.1 | SAMN04487958_101539 | SAMN04487958_104229 | Phosphoglycerol transferase. | DnaJ domain-containing protein. | 0.714 |
SER55380.1 | SES00901.1 | SAMN04487958_101539 | SAMN04487958_105231 | Phosphoglycerol transferase. | Hook-length control protein FliK. | 0.550 |
SER55380.1 | SES05053.1 | SAMN04487958_101539 | SAMN04487958_106104 | Phosphoglycerol transferase. | Membrane-bound lysozyme-inhibitor of c-type lysozyme. | 0.628 |
SER55380.1 | SES21467.1 | SAMN04487958_101539 | SAMN04487958_109145 | Phosphoglycerol transferase. | Glycerophosphoryl diester phosphodiesterase. | 0.572 |
SER55380.1 | SES21537.1 | SAMN04487958_101539 | SAMN04487958_109149 | Phosphoglycerol transferase. | AAA ATPase domain-containing protein. | 0.541 |
SER55380.1 | SES27007.1 | SAMN04487958_101539 | SAMN04487958_111112 | Phosphoglycerol transferase. | Hypothetical protein. | 0.580 |
SER55380.1 | SES35498.1 | SAMN04487958_101539 | SAMN04487958_11828 | Phosphoglycerol transferase. | Nuclease-related domain-containing protein. | 0.544 |
SER55444.1 | SER55380.1 | SAMN04487958_101541 | SAMN04487958_101539 | Glycosyltransferase involved in cell wall bisynthesis. | Phosphoglycerol transferase. | 0.622 |
SER55444.1 | SER55475.1 | SAMN04487958_101541 | SAMN04487958_101542 | Glycosyltransferase involved in cell wall bisynthesis. | ADP-heptose:LPS heptosyltransferase. | 0.928 |
SER55475.1 | SER55380.1 | SAMN04487958_101542 | SAMN04487958_101539 | ADP-heptose:LPS heptosyltransferase. | Phosphoglycerol transferase. | 0.608 |
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