STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER75073.1UDPglucose 6-dehydrogenase. (446 aa)    
Predicted Functional Partners:
SER75097.1
UDP-glucuronate 4-epimerase.
 
  0.940
SES16441.1
UTP--glucose-1-phosphate uridylyltransferase.
 
 0.873
SER55541.1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.802
SER75048.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
 0.723
SES16455.1
UDPglucose 6-dehydrogenase.
  
  
 
0.699
SER75236.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.653
SER75150.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.640
SER75216.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 
0.616
SER75192.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.608
SER75255.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.600
Your Current Organism:
Halomonas subterranea
NCBI taxonomy Id: 416874
Other names: CGMCC 1.6495, H. subterranea, Halomonas sp. ZG16, Halomonas subterranea Xu et al. 2007, JCM 14608, LMG 23977, LMG:23977, strain ZG16
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