Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER85053.1 | SER85068.1 | SAMN04487958_103279 | SAMN04487958_103280 | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | ABC-type uncharacterized transport system, substrate-binding protein. | 0.969 |
SER85053.1 | SER85087.1 | SAMN04487958_103279 | SAMN04487958_103281 | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | Hypothetical protein. | 0.869 |
SER85053.1 | SER85108.1 | SAMN04487958_103279 | SAMN04487958_103282 | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | Hypothetical protein. | 0.869 |
SER85053.1 | SER85128.1 | SAMN04487958_103279 | SAMN04487958_103283 | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.752 |
SER85053.1 | SER85154.1 | SAMN04487958_103279 | SAMN04487958_103284 | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.602 |
SER85068.1 | SER85053.1 | SAMN04487958_103280 | SAMN04487958_103279 | ABC-type uncharacterized transport system, substrate-binding protein. | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.969 |
SER85068.1 | SER85087.1 | SAMN04487958_103280 | SAMN04487958_103281 | ABC-type uncharacterized transport system, substrate-binding protein. | Hypothetical protein. | 0.869 |
SER85068.1 | SER85108.1 | SAMN04487958_103280 | SAMN04487958_103282 | ABC-type uncharacterized transport system, substrate-binding protein. | Hypothetical protein. | 0.869 |
SER85068.1 | SER85128.1 | SAMN04487958_103280 | SAMN04487958_103283 | ABC-type uncharacterized transport system, substrate-binding protein. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.752 |
SER85068.1 | SER85154.1 | SAMN04487958_103280 | SAMN04487958_103284 | ABC-type uncharacterized transport system, substrate-binding protein. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.632 |
SER85068.1 | SES23535.1 | SAMN04487958_103280 | SAMN04487958_11064 | ABC-type uncharacterized transport system, substrate-binding protein. | TraX protein. | 0.506 |
SER85087.1 | SER85053.1 | SAMN04487958_103281 | SAMN04487958_103279 | Hypothetical protein. | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.869 |
SER85087.1 | SER85068.1 | SAMN04487958_103281 | SAMN04487958_103280 | Hypothetical protein. | ABC-type uncharacterized transport system, substrate-binding protein. | 0.869 |
SER85087.1 | SER85108.1 | SAMN04487958_103281 | SAMN04487958_103282 | Hypothetical protein. | Hypothetical protein. | 0.869 |
SER85087.1 | SER85128.1 | SAMN04487958_103281 | SAMN04487958_103283 | Hypothetical protein. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.752 |
SER85087.1 | SER85154.1 | SAMN04487958_103281 | SAMN04487958_103284 | Hypothetical protein. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.645 |
SER85108.1 | SER85053.1 | SAMN04487958_103282 | SAMN04487958_103279 | Hypothetical protein. | ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.869 |
SER85108.1 | SER85068.1 | SAMN04487958_103282 | SAMN04487958_103280 | Hypothetical protein. | ABC-type uncharacterized transport system, substrate-binding protein. | 0.869 |
SER85108.1 | SER85087.1 | SAMN04487958_103282 | SAMN04487958_103281 | Hypothetical protein. | Hypothetical protein. | 0.869 |
SER85108.1 | SER85128.1 | SAMN04487958_103282 | SAMN04487958_103283 | Hypothetical protein. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.752 |
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