STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES03592.1Cysteine desulfurase. (385 aa)    
Predicted Functional Partners:
SER83725.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
   
 0.993
SES27136.1
tRNA 2-thiouridine synthesizing protein A.
   
 0.993
SER45939.1
Ferredoxin-NADP reductase.
  
 0.988
SES03576.1
Transcriptional regulator, BadM/Rrf2 family; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.
 
 
 0.981
SES03609.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
 
  
 0.978
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 
 0.976
SER66598.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
 0.949
SES10932.1
Adenylyltransferase and sulfurtransferase.
   
 0.948
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.940
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
   
 0.908
Your Current Organism:
Halomonas subterranea
NCBI taxonomy Id: 416874
Other names: CGMCC 1.6495, H. subterranea, Halomonas sp. ZG16, Halomonas subterranea Xu et al. 2007, JCM 14608, LMG 23977, LMG:23977, strain ZG16
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