Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER41054.1 | SER47888.1 | SAMN04487958_10121 | SAMN04487958_101273 | Cystathione beta-lyase. | O-acetylhomoserine sulfhydrylase. | 0.939 |
SER41054.1 | SES06216.1 | SAMN04487958_10121 | SAMN04487958_106173 | Cystathione beta-lyase. | Homoserine dehydrogenase. | 0.916 |
SER41054.1 | SES16856.1 | SAMN04487958_10121 | SAMN04487958_108117 | Cystathione beta-lyase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.944 |
SER41054.1 | thrB | SAMN04487958_10121 | SAMN04487958_106205 | Cystathione beta-lyase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.915 |
SER47888.1 | SER41054.1 | SAMN04487958_101273 | SAMN04487958_10121 | O-acetylhomoserine sulfhydrylase. | Cystathione beta-lyase. | 0.939 |
SER47888.1 | SES06216.1 | SAMN04487958_101273 | SAMN04487958_106173 | O-acetylhomoserine sulfhydrylase. | Homoserine dehydrogenase. | 0.939 |
SER47888.1 | SES16856.1 | SAMN04487958_101273 | SAMN04487958_108117 | O-acetylhomoserine sulfhydrylase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.983 |
SER47888.1 | thrB | SAMN04487958_101273 | SAMN04487958_106205 | O-acetylhomoserine sulfhydrylase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.903 |
SER96206.1 | SES16856.1 | SAMN04487958_1059 | SAMN04487958_108117 | Methionine biosynthesis protein MetW. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.513 |
SER96206.1 | thrB | SAMN04487958_1059 | SAMN04487958_106205 | Methionine biosynthesis protein MetW. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.664 |
SES04565.1 | SES06202.1 | SAMN04487958_10677 | SAMN04487958_106172 | Branched chain amino acid aminotransferase apoenzyme. | L-threonine synthase. | 0.519 |
SES04565.1 | SES06216.1 | SAMN04487958_10677 | SAMN04487958_106173 | Branched chain amino acid aminotransferase apoenzyme. | Homoserine dehydrogenase. | 0.946 |
SES04565.1 | SES16856.1 | SAMN04487958_10677 | SAMN04487958_108117 | Branched chain amino acid aminotransferase apoenzyme. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.468 |
SES04565.1 | ilvE | SAMN04487958_10677 | SAMN04487958_11920 | Branched chain amino acid aminotransferase apoenzyme. | Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.957 |
SES04565.1 | thrB | SAMN04487958_10677 | SAMN04487958_106205 | Branched chain amino acid aminotransferase apoenzyme. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.914 |
SES06202.1 | SES04565.1 | SAMN04487958_106172 | SAMN04487958_10677 | L-threonine synthase. | Branched chain amino acid aminotransferase apoenzyme. | 0.519 |
SES06202.1 | SES06216.1 | SAMN04487958_106172 | SAMN04487958_106173 | L-threonine synthase. | Homoserine dehydrogenase. | 0.997 |
SES06202.1 | SES16856.1 | SAMN04487958_106172 | SAMN04487958_108117 | L-threonine synthase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.556 |
SES06202.1 | ilvE | SAMN04487958_106172 | SAMN04487958_11920 | L-threonine synthase. | Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.413 |
SES06202.1 | thrB | SAMN04487958_106172 | SAMN04487958_106205 | L-threonine synthase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.964 |
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