STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES04784.1Putative thiamine transport system substrate-binding protein. (402 aa)    
Predicted Functional Partners:
SES04803.1
Putative thiamine transport system permease protein.
 
 
 0.981
SES04819.1
Putative thiamine transport system ATP-binding protein.
 
   
 0.972
SES04767.1
Phosphotransferase enzyme family protein.
 
     0.875
SES04834.1
Transferase 2, rSAM/selenodomain-associated.
       0.869
SES04851.1
Hypothetical protein.
       0.869
SES04869.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
    0.855
SER88141.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.804
SES04995.1
Sulfide:quinone oxidoreductase.
 
     0.561
SER85326.1
iron(III) transport system substrate-binding protein.
 
  
  0.481
SES11079.1
Putrescine transport system permease protein.
    
  0.466
Your Current Organism:
Halomonas subterranea
NCBI taxonomy Id: 416874
Other names: CGMCC 1.6495, H. subterranea, Halomonas sp. ZG16, Halomonas subterranea Xu et al. 2007, JCM 14608, LMG 23977, LMG:23977, strain ZG16
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