Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER41274.1 | SES31698.1 | SAMN04487958_10129 | SAMN04487958_11414 | Predicted oxidoreductase. | Aldo/keto reductase. | 0.724 |
SER47789.1 | SES31698.1 | SAMN04487958_101269 | SAMN04487958_11414 | Predicted oxidoreductase. | Aldo/keto reductase. | 0.719 |
SER79800.1 | SES31698.1 | SAMN04487958_10350 | SAMN04487958_11414 | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Aldo/keto reductase. | 0.610 |
SER91179.1 | SES31698.1 | SAMN04487958_104150 | SAMN04487958_11414 | Hypothetical protein. | Aldo/keto reductase. | 0.607 |
SES04459.1 | SES31698.1 | SAMN04487958_10670 | SAMN04487958_11414 | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | Aldo/keto reductase. | 0.704 |
SES16856.1 | SES17867.1 | SAMN04487958_108117 | SAMN04487958_108185 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Flavodoxin. | 0.937 |
SES16856.1 | SES31698.1 | SAMN04487958_108117 | SAMN04487958_11414 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aldo/keto reductase. | 0.840 |
SES17867.1 | SES16856.1 | SAMN04487958_108185 | SAMN04487958_108117 | Flavodoxin. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.937 |
SES17867.1 | SES31698.1 | SAMN04487958_108185 | SAMN04487958_11414 | Flavodoxin. | Aldo/keto reductase. | 0.721 |
SES23289.1 | SES31698.1 | SAMN04487958_11045 | SAMN04487958_11414 | Putative serine protein kinase, PrkA. | Aldo/keto reductase. | 0.732 |
SES31686.1 | SES31698.1 | SAMN04487958_11413 | SAMN04487958_11414 | Hypothetical protein. | Aldo/keto reductase. | 0.949 |
SES31686.1 | SES31704.1 | SAMN04487958_11413 | SAMN04487958_11415 | Hypothetical protein. | Hypothetical protein. | 0.782 |
SES31698.1 | SER41274.1 | SAMN04487958_11414 | SAMN04487958_10129 | Aldo/keto reductase. | Predicted oxidoreductase. | 0.724 |
SES31698.1 | SER47789.1 | SAMN04487958_11414 | SAMN04487958_101269 | Aldo/keto reductase. | Predicted oxidoreductase. | 0.719 |
SES31698.1 | SER79800.1 | SAMN04487958_11414 | SAMN04487958_10350 | Aldo/keto reductase. | S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.610 |
SES31698.1 | SER91179.1 | SAMN04487958_11414 | SAMN04487958_104150 | Aldo/keto reductase. | Hypothetical protein. | 0.607 |
SES31698.1 | SES04459.1 | SAMN04487958_11414 | SAMN04487958_10670 | Aldo/keto reductase. | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.704 |
SES31698.1 | SES16856.1 | SAMN04487958_11414 | SAMN04487958_108117 | Aldo/keto reductase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.840 |
SES31698.1 | SES17867.1 | SAMN04487958_11414 | SAMN04487958_108185 | Aldo/keto reductase. | Flavodoxin. | 0.721 |
SES31698.1 | SES23289.1 | SAMN04487958_11414 | SAMN04487958_11045 | Aldo/keto reductase. | Putative serine protein kinase, PrkA. | 0.732 |
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