jhhlp_008375 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_008375

Uncharacterized protein. (255 aa)

Predicted Functional Partners:

jhhlp_005931

0.872

jhhlp_005762

0.862

jhhlp_006833

0.835

jhhlp_001956

0.605

jhhlp_003243

0.533

jhhlp_001415

0.514

jhhlp_004387

0.479

jhhlp_001445

0.479

jhhlp_004536

0.478

jhhlp_000303

0.478

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000303	jhhlp_004536	A0A2N3NKS1	A0A2N3NBU8	NAD(P)-bd_dom domain-containing protein.	Epimerase domain-containing protein.	0.975
jhhlp_000303	jhhlp_005762	A0A2N3NKS1	A0A2N3N433	NAD(P)-bd_dom domain-containing protein.	Uncharacterized protein.	0.922
jhhlp_000303	jhhlp_005931	A0A2N3NKS1	A0A2N3N4H5	NAD(P)-bd_dom domain-containing protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.922
jhhlp_000303	jhhlp_006833	A0A2N3NKS1	A0A2N3N2V4	NAD(P)-bd_dom domain-containing protein.	Uncharacterized protein.	0.636
jhhlp_000303	jhhlp_008375	A0A2N3NKS1	A0A2N3MXU8	NAD(P)-bd_dom domain-containing protein.	Uncharacterized protein.	0.478
jhhlp_001415	jhhlp_008375	A0A2N3NI50	A0A2N3MXU8	Semialdhyde_dh domain-containing protein.	Uncharacterized protein.	0.514
jhhlp_001445	jhhlp_004387	A0A2N3NI78	A0A2N3NBE5	Uncharacterized protein.	Uncharacterized protein.	0.951
jhhlp_001445	jhhlp_005762	A0A2N3NI78	A0A2N3N433	Uncharacterized protein.	Uncharacterized protein.	0.602
jhhlp_001445	jhhlp_005931	A0A2N3NI78	A0A2N3N4H5	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.602
jhhlp_001445	jhhlp_008375	A0A2N3NI78	A0A2N3MXU8	Uncharacterized protein.	Uncharacterized protein.	0.479
jhhlp_001956	jhhlp_008375	A0A2N3NCL4	A0A2N3MXU8	SGL domain-containing protein.	Uncharacterized protein.	0.605
jhhlp_003243	jhhlp_008375	A0A2N3NGA3	A0A2N3MXU8	Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.	Uncharacterized protein.	0.533
jhhlp_004387	jhhlp_001445	A0A2N3NBE5	A0A2N3NI78	Uncharacterized protein.	Uncharacterized protein.	0.951
jhhlp_004387	jhhlp_005762	A0A2N3NBE5	A0A2N3N433	Uncharacterized protein.	Uncharacterized protein.	0.564
jhhlp_004387	jhhlp_005931	A0A2N3NBE5	A0A2N3N4H5	Uncharacterized protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.564
jhhlp_004387	jhhlp_008375	A0A2N3NBE5	A0A2N3MXU8	Uncharacterized protein.	Uncharacterized protein.	0.479
jhhlp_004536	jhhlp_000303	A0A2N3NBU8	A0A2N3NKS1	Epimerase domain-containing protein.	NAD(P)-bd_dom domain-containing protein.	0.975
jhhlp_004536	jhhlp_005762	A0A2N3NBU8	A0A2N3N433	Epimerase domain-containing protein.	Uncharacterized protein.	0.922
jhhlp_004536	jhhlp_005931	A0A2N3NBU8	A0A2N3N4H5	Epimerase domain-containing protein.	UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.	0.922
jhhlp_004536	jhhlp_006833	A0A2N3NBU8	A0A2N3N2V4	Epimerase domain-containing protein.	Uncharacterized protein.	0.574