STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_008386Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
jhhlp_007735
ANK_REP_REGION domain-containing protein.
   
  0.575
jhhlp_005609
MRG domain-containing protein.
    
  0.474
jhhlp_001137
Ubiquitin-like domain-containing protein.
    
  0.474
jhhlp_004189
Uncharacterized protein.
    
  0.466
jhhlp_000261
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.466
jhhlp_000235
Uncharacterized protein.
    
  0.465
jhhlp_005206
MPN domain-containing protein.
    
  0.464
jhhlp_005205
Uncharacterized protein.
    
  0.464
jhhlp_006390
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.458
jhhlp_002197
Uncharacterized protein.
    
 0.456
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.