STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_008411Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (345 aa)    
Predicted Functional Partners:
jhhlp_006480
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
 
 
0.992
jhhlp_004470
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.986
jhhlp_006246
Uncharacterized protein.
    
 0.983
jhhlp_005706
U3 small nucleolar RNA-associated protein 22.
   
 0.981
jhhlp_003544
WD_REPEATS_REGION domain-containing protein.
   
 
 0.956
jhhlp_006175
Uncharacterized protein.
    
  0.944
jhhlp_008323
Uncharacterized protein.
    
   0.943
jhhlp_007215
CBF domain-containing protein.
    
   0.943
jhhlp_005929
RNA helicase.
   
   0.943
jhhlp_006280
S4 RNA-binding domain-containing protein.
   
   0.943
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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