STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_008458Uncharacterized protein. (775 aa)    
Predicted Functional Partners:
jhhlp_004039
Uncharacterized protein.
 
 0.993
jhhlp_008455
Uncharacterized protein.
 
 0.990
jhhlp_003901
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
   
 0.832
jhhlp_007294
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.826
jhhlp_006272
SCP2 domain-containing protein.
    
 0.826
jhhlp_001437
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.808
jhhlp_006115
PKS_AT domain-containing protein.
  
 
 0.795
jhhlp_008748
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.788
jhhlp_001988
Uncharacterized protein.
   
  0.783
jhhlp_003286
Transket_pyr domain-containing protein.
  
 0.782
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.