jhhlp_008613 protein (Lomentospora prolificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

jhhlp_008613

Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (656 aa)

Predicted Functional Partners:

jhhlp_007149

0.980

jhhlp_006185

0.971

jhhlp_003188

0.970

jhhlp_000253

0.970

jhhlp_001019

0.952

jhhlp_007316

0.951

jhhlp_005161

0.951

jhhlp_001781

0.951

jhhlp_000426

0.951

jhhlp_001479

0.939

Your Current Organism:

Lomentospora prolificans

NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
jhhlp_000253	jhhlp_000426	A0A2N3NKE9	A0A2N3NKV8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.945
jhhlp_000253	jhhlp_001019	A0A2N3NKE9	A0A2N3NK63	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.979
jhhlp_000253	jhhlp_001479	A0A2N3NKE9	A0A2N3NIE6	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	DOC domain-containing protein.	0.835
jhhlp_000253	jhhlp_001781	A0A2N3NKE9	A0A2N3NGQ4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.936
jhhlp_000253	jhhlp_005161	A0A2N3NKE9	A0A2N3N703	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.936
jhhlp_000253	jhhlp_006185	A0A2N3NKE9	A0A2N3N565	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.975
jhhlp_000253	jhhlp_007149	A0A2N3NKE9	A0A2N3N1V1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.933
jhhlp_000253	jhhlp_007316	A0A2N3NKE9	A0A2N3N2B0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.974
jhhlp_000253	jhhlp_008613	A0A2N3NKE9	A0A2N3MYJ3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.970
jhhlp_000426	jhhlp_000253	A0A2N3NKV8	A0A2N3NKE9	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.945
jhhlp_000426	jhhlp_001019	A0A2N3NKV8	A0A2N3NK63	Uncharacterized protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.699
jhhlp_000426	jhhlp_001479	A0A2N3NKV8	A0A2N3NIE6	Uncharacterized protein.	DOC domain-containing protein.	0.951
jhhlp_000426	jhhlp_003188	A0A2N3NKV8	A0A2N3NG72	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.960
jhhlp_000426	jhhlp_006185	A0A2N3NKV8	A0A2N3N565	Uncharacterized protein.	Protein kinase domain-containing protein.	0.641
jhhlp_000426	jhhlp_007149	A0A2N3NKV8	A0A2N3N1V1	Uncharacterized protein.	Protein kinase domain-containing protein.	0.952
jhhlp_000426	jhhlp_007316	A0A2N3NKV8	A0A2N3N2B0	Uncharacterized protein.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.883
jhhlp_000426	jhhlp_008613	A0A2N3NKV8	A0A2N3MYJ3	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.951
jhhlp_001019	jhhlp_000253	A0A2N3NK63	A0A2N3NKE9	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.979
jhhlp_001019	jhhlp_000426	A0A2N3NK63	A0A2N3NKV8	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein.	0.699
jhhlp_001019	jhhlp_001781	A0A2N3NK63	A0A2N3NGQ4	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	WD_REPEATS_REGION domain-containing protein.	0.699