STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_008630zf-C2HE domain-containing protein. (247 aa)    
Predicted Functional Partners:
jhhlp_008633
Uncharacterized protein.
 
      0.884
jhhlp_003731
Uncharacterized protein.
    
 
 0.701
jhhlp_000026
DNA ligase.
   
 
 0.680
jhhlp_001166
PLD phosphodiesterase domain-containing protein.
    
 
 0.612
jhhlp_001375
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.585
jhhlp_003034
Poly [ADP-ribose] polymerase.
   
 
 0.571
jhhlp_001583
Uncharacterized protein.
    
 
 0.570
jhhlp_006306
WD_REPEATS_REGION domain-containing protein.
   
    0.561
jhhlp_006361
ENDO3c domain-containing protein.
    
 
 0.560
jhhlp_003454
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
    0.560
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.