STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_008159CDH-cyt domain-containing protein. (229 aa)    
Predicted Functional Partners:
jhhlp_002096
MRP-L46 domain-containing protein.
   
   0.729
jhhlp_001448
Uncharacterized protein.
   
   0.728
jhhlp_003630
Uncharacterized protein.
   
 
 0.710
jhhlp_001475
Uncharacterized protein.
   
   0.663
jhhlp_001934
Uncharacterized protein.
   
 
 0.662
jhhlp_000447
Uncharacterized protein.
   
   0.657
jhhlp_006127
MRP-S28 domain-containing protein.
   
   0.653
jhhlp_006039
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.650
jhhlp_000127
Ribosomal_L18e/L15P domain-containing protein.
   
   0.648
jhhlp_005877
Uncharacterized protein.
   
 
 0.646
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
Server load: low (26%) [HD]