STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_007822Macro domain-containing protein. (205 aa)    
Predicted Functional Partners:
jhhlp_002114
Uncharacterized protein.
 
      0.776
jhhlp_007326
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.744
jhhlp_005207
Hist_deacetyl domain-containing protein.
    
  0.744
jhhlp_003034
Poly [ADP-ribose] polymerase.
    
 
 0.625
jhhlp_003540
Hist_deacetyl domain-containing protein.
    
  0.607
jhhlp_003929
Hist_deacetyl domain-containing protein.
    
  0.607
jhhlp_001555
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
  0.607
jhhlp_006887
Uncharacterized protein.
     
 0.600
jhhlp_008357
Rieske domain-containing protein.
  
 0.526
jhhlp_008782
Pyr_redox_2 domain-containing protein.
  
 0.526
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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