STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_007056Uncharacterized protein. (1220 aa)    
Predicted Functional Partners:
jhhlp_006507
AAA domain-containing protein.
  
0.996
jhhlp_001102
TPR_REGION domain-containing protein.
   
 0.932
jhhlp_003579
Pex2_Pex12 domain-containing protein.
    
 0.923
jhhlp_000205
Pex14_N domain-containing protein.
    
 0.913
jhhlp_007352
RING-type domain-containing protein.
    
 0.897
jhhlp_005150
SH3 domain-containing protein.
    
 0.887
jhhlp_005167
SH3 domain-containing protein.
    
 0.887
jhhlp_001303
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.877
jhhlp_006391
Uncharacterized protein.
    
 0.865
jhhlp_000063
RING-type domain-containing protein.
    
 0.846
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.