STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_007061Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (329 aa)    
Predicted Functional Partners:
jhhlp_001570
Uncharacterized protein.
    
 0.980
jhhlp_002155
Uncharacterized protein.
    
 0.848
jhhlp_008297
Uncharacterized protein.
    
 0.817
jhhlp_001558
Uncharacterized protein.
    
 0.801
jhhlp_002536
Uncharacterized protein.
    
 0.799
jhhlp_003561
Uncharacterized protein.
    
 0.797
jhhlp_003560
Uncharacterized protein.
    
 0.797
jhhlp_004166
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
   
 0.794
jhhlp_003928
Uncharacterized protein.
    
 0.780
jhhlp_001454
Uncharacterized protein.
    
 0.770
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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