STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_007117Aminotran_1_2 domain-containing protein. (563 aa)    
Predicted Functional Partners:
jhhlp_000448
Tryptophan synthase.
   
 
 0.934
jhhlp_004679
Uncharacterized protein.
   
 
 0.912
jhhlp_000444
Aspartate aminotransferase.
  
 0.841
jhhlp_007718
Aspartate aminotransferase.
  
 0.840
jhhlp_008070
Uncharacterized protein.
   
 
 0.839
jhhlp_000296
Uncharacterized protein.
    
 0.837
jhhlp_003424
Chorismate mutase.
     
 0.834
jhhlp_000009
Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.
    
 0.832
jhhlp_001437
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.813
jhhlp_005886
Aminotran_1_2 domain-containing protein.
   
 
  0.801
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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