STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_007123AA_TRNA_LIGASE_II domain-containing protein. (544 aa)    
Predicted Functional Partners:
jhhlp_003659
S1 motif domain-containing protein.
   
 0.922
jhhlp_001023
Histidine biosynthesis trifunctional protein.
    
 0.909
jhhlp_002362
Uncharacterized protein.
  
 0.895
jhhlp_006590
Uncharacterized protein.
     
0.866
jhhlp_000925
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.845
jhhlp_007817
Uncharacterized protein.
   
 
 0.831
jhhlp_007417
Tr-type G domain-containing protein.
   
 0.820
jhhlp_004238
Uncharacterized protein.
   
 
 0.812
jhhlp_003755
tRNA-binding domain-containing protein.
  
 
 0.793
jhhlp_003242
Lysine--tRNA ligase.
   
 
 0.774
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.