STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jhhlp_007144RNB domain-containing protein. (998 aa)    
Predicted Functional Partners:
jhhlp_002546
S1 domain-containing protein.
   
 0.956
jhhlp_000899
Uncharacterized protein.
   
 0.956
jhhlp_005592
RNase_PH domain-containing protein.
   
 0.950
jhhlp_004396
Uncharacterized protein.
   
 
 0.950
jhhlp_004167
RNase_PH domain-containing protein.
   
 0.944
jhhlp_006112
ECR1_N domain-containing protein.
    
 0.938
jhhlp_003802
Uncharacterized protein.
   
 0.936
jhhlp_001072
Uncharacterized protein.
   
 0.924
jhhlp_005293
RNase_PH domain-containing protein.
   
 0.916
jhhlp_003266
Tr-type G domain-containing protein.
   
 0.915
Your Current Organism:
Lomentospora prolificans
NCBI taxonomy Id: 41688
Other names: CBS 467.74, IMI 188615, L. prolificans, MUCL 18141, Scedosporium inflatum, Scedosporium prolificans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.